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{bionix}:
with bionix; let
R = pkgs.rWrapper.override {packages = with pkgs.rPackages; [edgeR];};
counts = pkgs.fetchurl {
url = "https://raw.githubusercontent.com/ucdavis-bioinformatics-training/2018-September-Bioinformatics-Prerequisites/master/friday/counts.tsv";
sha256 = "sha256-ZmZ+vC4mKnmZKVJqbnEujDngwnSTZAxvQaZaNClUUWE=";
};
in
stage {
inherit counts;
name = "r-ex";
buildInputs = [R];
buildCommand = ''
Rscript ${./script.R}
'';
}
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