aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Bedo <cu@cua0.org>2019-01-10 11:42:15 +1100
committerJustin Bedo <cu@cua0.org>2019-01-10 11:42:15 +1100
commit1b5e2b206d00967100e4ddf48c48ba0662bb0eb9 (patch)
tree8e566fea4a3d888b7f9010d0b72d0c32a6ba6d8a
parentf54046d05135e49cf2ca3e01d8d113e2a93705c0 (diff)
ref: add UCSC gene annotations
-rwxr-xr-xlib/references.nix8
1 files changed, 8 insertions, 0 deletions
diff --git a/lib/references.nix b/lib/references.nix
index 2e5e937..cf9b7ef 100755
--- a/lib/references.nix
+++ b/lib/references.nix
@@ -94,6 +94,14 @@ rec {
};
};
};
+ UCSCgenes = stage {
+ name = "UCSCgenes";
+ src = pkgs.fetchurl {
+ url = "http://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/refFlat.txt.gz";
+ sha256 = "0jfrsmrp6386lw9wq48rs5i0qmm3ijb7ardhkcp29bzvbwf9lqaq";
+ };
+ buildCommand = "gunzip < $src > $out";
+ };
};
grcm38 = grcm38-p6;