diff options
author | Justin Bedo <cu@cua0.org> | 2019-06-11 17:35:35 +1000 |
---|---|---|
committer | Justin Bedo <cu@cua0.org> | 2019-06-11 18:23:28 +1000 |
commit | e82405f0e8e4680aa6a39556810535e5c1d88487 (patch) | |
tree | c550684a6778030c406f9c4ccc13806374c09569 | |
parent | 59f74368d35505d30d9f0fa51f223e1ae15a4d67 (diff) |
slurm: allow salloc path to be overridden in stage calls
salloc was missing from defaults, preventing overriding of salloc path
for each stage.
-rw-r--r-- | default.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/default.nix b/default.nix index 54d0215..edb9377 100644 --- a/default.nix +++ b/default.nix @@ -38,7 +38,7 @@ let fastp = callBionix ./tools/fastp.nix {}; slurm = attrs: bionix.extend (self: super: with self; rec { - slurmDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; partition = null; slurmFlags = null; } // attrs; + slurmDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; partition = null; slurmFlags = null; salloc = "/usr/bin/salloc"; } // attrs; slurm = attrs: (callPackage ./lib/slurm.nix {}) (slurmDefs // attrs); exec = f: x: y: slurm (builtins.intersectAttrs slurmDefs x) (f (builtins.removeAttrs x (builtins.attrNames slurmDefs)) y); }); |