diff options
author | Justin Bedo <cu@cua0.org> | 2019-05-16 21:18:27 +1000 |
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committer | Justin Bedo <cu@cua0.org> | 2019-05-16 21:46:02 +1000 |
commit | d5fd734513671d957c20a66655c98d325bb1760f (patch) | |
tree | df0ab9cf8b9806f939723cb2e0827aa047185948 /default.nix | |
parent | fa35a2634108bd179de0c7dd21ca5355f6918a9b (diff) |
slurm: renamed from sbatch
Diffstat (limited to 'default.nix')
-rw-r--r-- | default.nix | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/default.nix b/default.nix index 575d176..15b8d87 100644 --- a/default.nix +++ b/default.nix @@ -36,10 +36,10 @@ let ascat = callBionix ./tools/ascat.nix {}; fastp = callBionix ./tools/fastp.nix {}; - sbatch = attrs: bionix.extend (self: super: with self; rec { - sbatchDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; partition = null; slurmFlags = null; } // attrs; - sbatch = attrs: (callPackage ./lib/sbatch.nix {}) (sbatchDefs // attrs); - exec = f: x: y: sbatch (builtins.intersectAttrs sbatchDefs x) (f (builtins.removeAttrs x (builtins.attrNames sbatchDefs)) y); + slurm = attrs: bionix.extend (self: super: with self; rec { + slurmDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; partition = null; slurmFlags = null; } // attrs; + slurm = attrs: (callPackage ./lib/slurm.nix {}) (slurmDefs // attrs); + exec = f: x: y: slurm (builtins.intersectAttrs slurmDefs x) (f (builtins.removeAttrs x (builtins.attrNames slurmDefs)) y); }); qsub = attrs: bionix.extend (self: super: with self; rec { qsubDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; tmpDir = "/tmp"; sleepTime = 60; queue = null; qsubFlags = null; } // attrs; |