treewide reformatting and simplification

- simplify with statix
- reformat with nixpkgs-fmt

1 files changed, 9 insertions, 7 deletions

diff --git a/examples/call.nix b/examples/call.nix
index 8a38fdb..81a112e 100644
--- a/examples/call.nix
+++ b/examples/call.nix
@@ -2,9 +2,10 @@
 # with the Platypus variant caller. Each input is preprocessed by aligning
 # against a reference genome (defaults to GRCH38), fixing mate information, and
 # marking duplicates. Finally platypus is called over all samples.
-{bionix ? import <bionix> {}
-,inputs
-,ref ? bionix.ref.grch38.seq }:
+{ bionix ? import <bionix> { }
+, inputs
+, ref ? bionix.ref.grch38.seq
+}:
 
 with bionix;
 with lib;
@@ -13,9 +14,10 @@ let
   preprocess = flip pipe [
     (bwa.align { inherit ref; })
     (samtools.sort { nameSort = true; })
-    (samtools.fixmate {})
-    (samtools.sort {})
-    (samtools.markdup {})
+    (samtools.fixmate { })
+    (samtools.sort { })
+    (samtools.markdup { })
   ];
 
-in platypus.call {} (map preprocess inputs)
+in
+platypus.call { } (map preprocess inputs)