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author | Justin Bedo <cu@cua0.org> | 2020-12-08 10:01:39 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2020-12-08 10:01:39 +1100 |
commit | ba248122fe57add929046f304844a7fa14b47207 (patch) | |
tree | 8646ea4190c5e5f1e0aaece5deb017f7dba026ba /slides.tex | |
parent | 5cf9dcf15c3e384d02b81e81cb3e2c4a1de0efa4 (diff) |
add reference to bionix paper and repowehi-talk
Diffstat (limited to 'slides.tex')
-rw-r--r-- | slides.tex | 18 |
1 files changed, 1 insertions, 17 deletions
@@ -180,23 +180,6 @@ \end{frame} \begin{frame} - \frametitle{HPC execution} - \begin{minipage}{.3\textwidth} - \begin{overprint} - \onslide<1>\includegraphics[width=\linewidth]{slurm} - \onslide<2>\includegraphics[width=\linewidth]{cluster} - \end{overprint} - \end{minipage} - \begin{minipage}{.68\textwidth} - \begin{enumerate} - \item Easy implementation due to derivation overriding pattern from Nix - \item Call \Verb|(bionix.slurm \{ ... \}).samtools.sort| instead of \Verb|bionix.samtools.sort| - \onslide<2>\item Easy to shift previous example to HPC execution - \end{enumerate} - \end{minipage} -\end{frame} - -\begin{frame} \frametitle{Stafford Fox Rare Cancer Project} \begin{enumerate} \item $\geq100$ WGS/WES samples totalling 20 TiB of primary data @@ -290,6 +273,7 @@ \item BioNix provides a high degree of reproducibility \item Obviates the need for multiple technologies (i.e., package managers and containers) \item Workflows as function composition, simplifying specification + \item BioNix~\autocite{Bed2020} available at \url{https://github.com/PapenfussLab/BioNix} \end{enumerate} \end{frame} |