draft HPC slide

1 files changed, 17 insertions, 0 deletions

diff --git a/slides.tex b/slides.tex
index 3b0016f..fe5bccf 100644
--- a/slides.tex
+++ b/slides.tex
@@ -1,5 +1,8 @@
 \documentclass[aspectratio=169]{beamer}
 
+\usepackage{fancyvrb}
+\usepackage{tgcursor}
+
 \usepackage{microtype}
 \usepackage{tikz}
 \usetikzlibrary{fit}
@@ -174,12 +177,26 @@
 \end{frame}
 
 \begin{frame}
+  \frametitle{HPC execution}
+  \begin{minipage}{.3\textwidth}
+  \includegraphics[width=\linewidth]{slurm}
+  \end{minipage}
+  \begin{minipage}{.68\textwidth}
+  \begin{enumerate}
+    \item Easy implementation due to derivation overloading pattern from Nix
+    \item Call \Verb|(bionix.slurm  \{ ... \}).samtools.sort| instead of \Verb|bionix.samtools.sort|
+  \end{enumerate}
+  \end{minipage}
+\end{frame}
+
+\begin{frame}
   \frametitle{Real-world usage at WEHI}
   \begin{enumerate}
     \item Stafford Fox Rare Cancer Project
     \item $\geq100$ WGS/WES samples totalling 20 TiB of primary data
     \item SNV calling, neoantigen prediction, structural variants, copy number, mutational signatures, and report generation
     \item CI ensures reports are always up to date and consistent across the cohort
+    \item Processed at Pawsey (Slurm) and WEHI (PBS \& Slurm)
   \end{enumerate}
 \end{frame}