diff options
author | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
commit | bac9248a5e08e8afdf5485a6e27cfe72e1ca5090 (patch) | |
tree | 8719a280b56122017d46b582cd3da8547dd3f548 /tools/cnvkit.nix | |
parent | ab809b8c77efdad9fb54d3591a0193a1cbe888d1 (diff) |
treewide reformatting and simplification
- simplify with statix
- reformat with nixpkgs-fmt
Diffstat (limited to 'tools/cnvkit.nix')
-rw-r--r-- | tools/cnvkit.nix | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/tools/cnvkit.nix b/tools/cnvkit.nix index fc55d94..812652a 100644 --- a/tools/cnvkit.nix +++ b/tools/cnvkit.nix @@ -1,15 +1,15 @@ -{bionix}: +{ bionix }: with bionix; { /* Call CNVs - Type: callCNV :: {targets :: target file, annotations :: annotation file, ...} -> {normals :: [bam], tumours :: [bam]} -> CNVs + Type: callCNV :: {targets :: target file, annotations :: annotation file, ...} -> {normals :: [bam], tumours :: [bam]} -> CNVs */ callCNV = callBionixE ./cnvkit-batch.nix; /* Scatter plot from CNV calls - Type: scatterPlot :: {} -> CNVs -> PDF + Type: scatterPlot :: {} -> CNVs -> PDF */ scatterPlot = callBionixE ./cnvkit-scatter.nix; } |