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| author | Justin Bedo <cu@cua0.org> | 2020-08-10 09:43:37 +1000 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2020-08-10 09:43:37 +1000 |
| commit | a3d00678c31829b96f503c701cdc3c47e6c2e23e (patch) | |
| tree | 44512e7ddf0fc946e885ef8c1bac36104f145edb /tools/hisat2-index.nix | |
| parent | bae57d22d7a626c12660f966eba0d2514d376860 (diff) | |
hisat2: add index prefix
Diffstat (limited to 'tools/hisat2-index.nix')
| -rw-r--r-- | tools/hisat2-index.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/hisat2-index.nix b/tools/hisat2-index.nix index 82935eb..ffdb4ed 100644 --- a/tools/hisat2-index.nix +++ b/tools/hisat2-index.nix @@ -21,7 +21,7 @@ stage { mkdir $out hisat2-build -p $NIX_BUILD_CORES ${optionalString (flags != null) flags} \ ${optionalString (gtf != null) "--ss ${hisat2.extractSpliceSites extractSpliceSitesAttrs gtf} --exon ${hisat2.extractExons extractExonsAttrs gtf}"} \ - ref.fa $out/ + ref.fa $out/index ''; passthru.multicore = true; } |