diff options
author | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
commit | bac9248a5e08e8afdf5485a6e27cfe72e1ca5090 (patch) | |
tree | 8719a280b56122017d46b582cd3da8547dd3f548 /tools/kallisto.nix | |
parent | ab809b8c77efdad9fb54d3591a0193a1cbe888d1 (diff) |
treewide reformatting and simplification
- simplify with statix
- reformat with nixpkgs-fmt
Diffstat (limited to 'tools/kallisto.nix')
-rw-r--r-- | tools/kallisto.nix | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/tools/kallisto.nix b/tools/kallisto.nix index 13de61e..e096d11 100644 --- a/tools/kallisto.nix +++ b/tools/kallisto.nix @@ -1,4 +1,4 @@ -{bionix}: +{ bionix }: with bionix; @@ -6,7 +6,7 @@ with bionix; index = callBionixE ./kallisto-index.nix; /* Quantify reads against a transcriptome - Type: { bias :: bool, bootstrapSamples :: int, seed :: int, plaintext :: bool, fusion :: bool, single :: bool, frStranded :: bool, rfStranded :: bool, fragmentLength :: Int, fragmentSD :: real } -> [fastq] -> kallisto + Type: { bias :: bool, bootstrapSamples :: int, seed :: int, plaintext :: bool, fusion :: bool, single :: bool, frStranded :: bool, rfStranded :: bool, fragmentLength :: Int, fragmentSD :: real } -> [fastq] -> kallisto */ quant = callBionixE ./kallisto-quant.nix; } |