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| author | Justin Bedo <cu@cua0.org> | 2021-02-03 11:49:23 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2021-02-03 11:49:23 +1100 |
| commit | c7756678c8a543f216654d518eeee3c4bd6a4b8f (patch) | |
| tree | 098183330e8d7f5505570e7769a985eef83ecc51 /tools/kallisto.nix | |
| parent | cac21d3ab1fd96724b568f675794c83273a27aee (diff) | |
add inline documentation
Diffstat (limited to 'tools/kallisto.nix')
| -rw-r--r-- | tools/kallisto.nix | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/tools/kallisto.nix b/tools/kallisto.nix index 31e15d9..13de61e 100644 --- a/tools/kallisto.nix +++ b/tools/kallisto.nix @@ -4,5 +4,9 @@ with bionix; { index = callBionixE ./kallisto-index.nix; + + /* Quantify reads against a transcriptome + Type: { bias :: bool, bootstrapSamples :: int, seed :: int, plaintext :: bool, fusion :: bool, single :: bool, frStranded :: bool, rfStranded :: bool, fragmentLength :: Int, fragmentSD :: real } -> [fastq] -> kallisto + */ quant = callBionixE ./kallisto-quant.nix; } |