diff options
Diffstat (limited to 'tools/kallisto.nix')
| -rw-r--r-- | tools/kallisto.nix | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/tools/kallisto.nix b/tools/kallisto.nix index 31e15d9..13de61e 100644 --- a/tools/kallisto.nix +++ b/tools/kallisto.nix @@ -4,5 +4,9 @@ with bionix; { index = callBionixE ./kallisto-index.nix; + + /* Quantify reads against a transcriptome + Type: { bias :: bool, bootstrapSamples :: int, seed :: int, plaintext :: bool, fusion :: bool, single :: bool, frStranded :: bool, rfStranded :: bool, fragmentLength :: Int, fragmentSD :: real } -> [fastq] -> kallisto + */ quant = callBionixE ./kallisto-quant.nix; } |