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| author | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
| commit | bac9248a5e08e8afdf5485a6e27cfe72e1ca5090 (patch) | |
| tree | 8719a280b56122017d46b582cd3da8547dd3f548 /tools/manta-call.nix | |
| parent | ab809b8c77efdad9fb54d3591a0193a1cbe888d1 (diff) | |
treewide reformatting and simplification
- simplify with statix
- reformat with nixpkgs-fmt
Diffstat (limited to 'tools/manta-call.nix')
| -rw-r--r-- | tools/manta-call.nix | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/tools/manta-call.nix b/tools/manta-call.nix index 099d5e6..21cbeba 100644 --- a/tools/manta-call.nix +++ b/tools/manta-call.nix @@ -1,6 +1,6 @@ -{ bionix, indexAttrs ? {}, faidxAttrs ? {}, flags ? "" }: +{ bionix, indexAttrs ? { }, faidxAttrs ? { }, flags ? "" }: -{ normals ? [], tumour ? null }: +{ normals ? [ ], tumour ? null }: with bionix; with lib; @@ -8,7 +8,7 @@ with types; let getref = matchFiletype "manta-call" { bam = x: x.ref; }; - refs = map getref normals ++ optionals (tumour != null) [(getref tumour)]; + refs = map getref normals ++ optionals (tumour != null) [ (getref tumour) ]; ref = head refs; renameAndIndex = f: stage { |