diff options
Diffstat (limited to 'tools/manta-call.nix')
| -rw-r--r-- | tools/manta-call.nix | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/tools/manta-call.nix b/tools/manta-call.nix index 099d5e6..21cbeba 100644 --- a/tools/manta-call.nix +++ b/tools/manta-call.nix @@ -1,6 +1,6 @@ -{ bionix, indexAttrs ? {}, faidxAttrs ? {}, flags ? "" }: +{ bionix, indexAttrs ? { }, faidxAttrs ? { }, flags ? "" }: -{ normals ? [], tumour ? null }: +{ normals ? [ ], tumour ? null }: with bionix; with lib; @@ -8,7 +8,7 @@ with types; let getref = matchFiletype "manta-call" { bam = x: x.ref; }; - refs = map getref normals ++ optionals (tumour != null) [(getref tumour)]; + refs = map getref normals ++ optionals (tumour != null) [ (getref tumour) ]; ref = head refs; renameAndIndex = f: stage { |