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| author | Justin Bedo <cu@cua0.org> | 2022-05-16 12:46:12 +1000 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2022-05-16 13:07:24 +1000 |
| commit | 2bd2c3958ed91ef3bbea2fc3e077a8c03a648a1b (patch) | |
| tree | 8d12d5f861a0ef6194fdd055586527ab998b151e /tools/quip-quip.nix | |
| parent | 61a05c73159f4578322ba9a59ab8ee7a5f1fb1b4 (diff) | |
quip: init
Diffstat (limited to 'tools/quip-quip.nix')
| -rw-r--r-- | tools/quip-quip.nix | 17 |
1 files changed, 17 insertions, 0 deletions
diff --git a/tools/quip-quip.nix b/tools/quip-quip.nix new file mode 100644 index 0000000..77cf557 --- /dev/null +++ b/tools/quip-quip.nix @@ -0,0 +1,17 @@ +{bionix}: +with bionix; +with lib.types; + input: let + ref = matchFiletype "quip" {bam = f: f.ref;} input; + in + stage { + name = "quip"; + buildInputs = [quip.app]; + buildCommand = '' + ln -s ${input} input.bam + quip -r ${ref} input.bam + cp input.bam.qp $out + ''; + stripStorePaths = false; + passthru.filetype = filetype.qp input.filetype; + } |