sambamba: init

1 files changed, 15 insertions, 0 deletions

diff --git a/tools/sambamba.nix b/tools/sambamba.nix
new file mode 100644
index 0000000..552e6e3
--- /dev/null
+++ b/tools/sambamba.nix
@@ -0,0 +1,15 @@
+{ bionix }:
+
+with bionix;
+
+let
+  gen = callBionixE ./sambamba-generic.nix;
+
+in {
+  sort = callBionixE ./sambamba-sort.nix;
+  index = def gen {tool = "index"; };
+  merge = def gen {tool = "merge"; };
+  slice = def gen {tool = "slice"; };
+  flagstat = def gen {tool = "flagstat"; };
+  markdup = def gen {tool = "markdup"; };
+}