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-rw-r--r--tools/sambamba.nix15
1 files changed, 15 insertions, 0 deletions
diff --git a/tools/sambamba.nix b/tools/sambamba.nix
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--- /dev/null
+++ b/tools/sambamba.nix
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+{ bionix }:
+
+with bionix;
+
+let
+ gen = callBionixE ./sambamba-generic.nix;
+
+in {
+ sort = callBionixE ./sambamba-sort.nix;
+ index = def gen {tool = "index"; };
+ merge = def gen {tool = "merge"; };
+ slice = def gen {tool = "slice"; };
+ flagstat = def gen {tool = "flagstat"; };
+ markdup = def gen {tool = "markdup"; };
+}