diff options
author | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
commit | bac9248a5e08e8afdf5485a6e27cfe72e1ca5090 (patch) | |
tree | 8719a280b56122017d46b582cd3da8547dd3f548 /tools/snpeff.nix | |
parent | ab809b8c77efdad9fb54d3591a0193a1cbe888d1 (diff) |
treewide reformatting and simplification
- simplify with statix
- reformat with nixpkgs-fmt
Diffstat (limited to 'tools/snpeff.nix')
-rw-r--r-- | tools/snpeff.nix | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/tools/snpeff.nix b/tools/snpeff.nix index fb3f4a9..45a0edc 100644 --- a/tools/snpeff.nix +++ b/tools/snpeff.nix @@ -1,15 +1,15 @@ -{bionix}: +{ bionix }: with bionix; { /* Annotate variants with SNPEff database. Some annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.db). - Type: { db, ... } -> vcf -> vcf + Type: { db, ... } -> vcf -> vcf */ annotate = callBionixE ./snpeff-annotate.nix; - + /* Annotate variants with dbNSFP database. Some dbNSFP annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.dbNSFP). - Type: { dbnsfp, ... } -> vcf -> vcf + Type: { dbnsfp, ... } -> vcf -> vcf */ dbnsfp = callBionixE ./snpeff-dbnsfp.nix; } |