diff options
Diffstat (limited to 'tools/snpeff.nix')
| -rw-r--r-- | tools/snpeff.nix | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/tools/snpeff.nix b/tools/snpeff.nix index fb3f4a9..45a0edc 100644 --- a/tools/snpeff.nix +++ b/tools/snpeff.nix @@ -1,15 +1,15 @@ -{bionix}: +{ bionix }: with bionix; { /* Annotate variants with SNPEff database. Some annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.db). - Type: { db, ... } -> vcf -> vcf + Type: { db, ... } -> vcf -> vcf */ annotate = callBionixE ./snpeff-annotate.nix; - + /* Annotate variants with dbNSFP database. Some dbNSFP annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.dbNSFP). - Type: { dbnsfp, ... } -> vcf -> vcf + Type: { dbnsfp, ... } -> vcf -> vcf */ dbnsfp = callBionixE ./snpeff-dbnsfp.nix; } |