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author | Justin Bedo <cu@cua0.org> | 2021-02-03 11:49:23 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2021-02-03 11:49:23 +1100 |
commit | c7756678c8a543f216654d518eeee3c4bd6a4b8f (patch) | |
tree | 098183330e8d7f5505570e7769a985eef83ecc51 /tools/snpeff.nix | |
parent | cac21d3ab1fd96724b568f675794c83273a27aee (diff) |
add inline documentation
Diffstat (limited to 'tools/snpeff.nix')
-rw-r--r-- | tools/snpeff.nix | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/tools/snpeff.nix b/tools/snpeff.nix index c5ef04d..fb3f4a9 100644 --- a/tools/snpeff.nix +++ b/tools/snpeff.nix @@ -3,6 +3,13 @@ with bionix; { + /* Annotate variants with SNPEff database. Some annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.db). + Type: { db, ... } -> vcf -> vcf + */ annotate = callBionixE ./snpeff-annotate.nix; + + /* Annotate variants with dbNSFP database. Some dbNSFP annotation DBs available in bionix.ref (e.g., bionix.ref.grch38.snpeff.dbNSFP). + Type: { dbnsfp, ... } -> vcf -> vcf + */ dbnsfp = callBionixE ./snpeff-dbnsfp.nix; } |