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author | Justin Bedo <cu@cua0.org> | 2019-03-06 13:18:41 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2019-03-06 13:18:41 +1100 |
commit | 1ff9422ec0ab086a97c4acab5c8f4d15c2026172 (patch) | |
tree | e30d643b4750e23478ccc7388353e8ca491c4c2f /tools | |
parent | a86ef4eda927c47791dc0c25852c13ea622f809b (diff) |
api docs: init bowtie
Diffstat (limited to 'tools')
-rw-r--r-- | tools/bowtie.nix | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/tools/bowtie.nix b/tools/bowtie.nix index a4439d3..df97d36 100644 --- a/tools/bowtie.nix +++ b/tools/bowtie.nix @@ -3,6 +3,13 @@ with bionix; { + /* Align a sequence against a reference + Type: align :: {ref :: fasta, bamOutput :: bool, ...} -> {input1 :: fastq, input2 :: fastq} -> bam/sam + */ align = callBionixE ./bowtie-align.nix; + + /* Create a Bowtie index + Type: index :: {seed :: int, ...} -> fasta -> index + */ index = callBionixE ./bowtie-index.nix; } |