aboutsummaryrefslogtreecommitdiff
path: root/tools
diff options
context:
space:
mode:
authorJustin Bedo <cu@cua0.org>2019-01-13 08:50:32 +1100
committerJustin Bedo <cu@cua0.org>2019-01-13 08:50:32 +1100
commitd98c0d62587ffb4b6f7106d07dfa16de729dbc8e (patch)
treec7d724873af2857baea353a98251f25e32da36d3 /tools
parent4d3379075d12ca2b4d89c9ff119a4d6aea53136e (diff)
snpeff: fix dbnsfp
Diffstat (limited to 'tools')
-rw-r--r--tools/snpeff-dbnsfp.nix2
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/snpeff-dbnsfp.nix b/tools/snpeff-dbnsfp.nix
index 5e7c91a..dd94760 100644
--- a/tools/snpeff-dbnsfp.nix
+++ b/tools/snpeff-dbnsfp.nix
@@ -14,7 +14,7 @@ stage {
buildCommand = ''
ln -s ${dbnsfp.db} dbNSFP.txt.gz
ln -s ${dbnsfp.index} dbNSFP.txt.gz.tbi
- snpeff dbnsfp -db dbNSFP.txt.gz ${input} > $out
+ snpsift dbnsfp -db dbNSFP.txt.gz ${input} > $out
'';
buildInputs = [ snpeff ];
passthru.filetype = input.filetype;