diff options
| author | Justin Bedo <cu@cua0.org> | 2022-01-12 11:02:37 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2022-01-12 11:02:37 +1100 |
| commit | fc09e84a593aaedc1a23b17f0b1d8dda2df606df (patch) | |
| tree | 736a0241411bbf561ddf4157a2c136d57602bef1 /tools | |
| parent | 51951403ec33c415df715d8db5ebfcd0bbebcb7f (diff) | |
gridss: add somatic variant filtering
Diffstat (limited to 'tools')
| -rw-r--r-- | tools/gridss.nix | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/tools/gridss.nix b/tools/gridss.nix index f52eb6e..f5b1e0e 100644 --- a/tools/gridss.nix +++ b/tools/gridss.nix @@ -100,4 +100,6 @@ rec { # As call but include assemblies in output callAndAssemble = inputs: gridss.annotateAndAssemble { } (map gridss.preprocessBam inputs); + + filterSomatic = callBionixE ./gridss-somatic-filter.nix; } |