diff options
| -rw-r--r-- | test-tnpair.nix | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/test-tnpair.nix b/test-tnpair.nix index afbdf68..5d9fee2 100644 --- a/test-tnpair.nix +++ b/test-tnpair.nix @@ -64,6 +64,7 @@ let }; testNaming = linkOutputs { + kallisto = kallisto.quant {inherit ref;} (attrValues tnpair.tumour.files); facets = facets.callCNV {} {vcf = tnpairResult.platypusVars; bams = with tnpairResult.alignments; [ normal tumour ];}; cnvkit = cnvkitResults.cnvs; "cnvkit.pdf" = cnvkitResults.plot; |