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-rw-r--r--examples/README.md7
1 files changed, 4 insertions, 3 deletions
diff --git a/examples/README.md b/examples/README.md
index 1689709..b12c172 100644
--- a/examples/README.md
+++ b/examples/README.md
@@ -3,7 +3,8 @@
This directory has a few example workflows in bionix along with example
data. A basic workflow is defined in `call.nix`, and an example of
applying it to the sample data is in `default.nix`. To build the
-`default.nix` workflow, run ```nix build``` from this directory.
+`default.nix` workflow, run ```nix build -I bionix=../``` from this directory.
+Note that the location of BioNix
## NextFlow and WDL translations
@@ -12,12 +13,12 @@ from the NextFlow and WDL documentation respectively.
The NextFlow translated example does not come with example data. It can be built with
```
-nix build -f nextflow-example1.nix --arg input /path/to/sample.fa
+nix build -f nextflow-example1.nix -I bionix=../.. --arg input /path/to/sample.fa
```
The WDL example requires no extra data and can be built with
```
-nix build -f wdl-scatter-gather.nix
+nix build -f wdl-scatter-gather.nix -I bionix=../..
```
## Example script wrapper