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-rw-r--r--tools/bwa-index.nix2
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/bwa-index.nix b/tools/bwa-index.nix
index 3f9d385..48a2556 100644
--- a/tools/bwa-index.nix
+++ b/tools/bwa-index.nix
@@ -12,7 +12,7 @@ stdenv.mkDerivation {
name = "bwa-index";
buildInputs = [ bwa ];
buildCommand = ''
- ln -s ${ref} ref.fa
+ ln -s ${ref.seq} ref.fa
bwa index ${optionalString (flags != null) flags} ref.fa
mkdir $out
mv ref.fa.* $out