diff options
Diffstat (limited to 'tools/bwa-mem2.nix')
| -rw-r--r-- | tools/bwa-mem2.nix | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/tools/bwa-mem2.nix b/tools/bwa-mem2.nix index e6237f0..1c98167 100644 --- a/tools/bwa-mem2.nix +++ b/tools/bwa-mem2.nix @@ -40,4 +40,5 @@ stage { ''; passthru.filetype = if bamOutput then filetype.bam { inherit ref; sorting = sort.none { }; } else filetype.sam { inherit ref; sorting = sort.name { }; }; passthru.multicore = true; + stripStorePaths = !bamOutput; } |