diff options
Diffstat (limited to 'tools/gridss-callVariants.nix')
| -rw-r--r-- | tools/gridss-callVariants.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/gridss-callVariants.nix b/tools/gridss-callVariants.nix index e431560..c313c3f 100644 --- a/tools/gridss-callVariants.nix +++ b/tools/gridss-callVariants.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { sha256 = "01srl3qvv060whqg1y1fpxjc5cwga5wscs1bmf1v3z87dignra7k"; }; buildCommand = '' - ln -s ${ref} ref.fa + ln -s ${ref.seq} ref.fa ln -s ${bionix.samtools.faidx faidxAttrs ref} ref.fa.fai for f in ${bionix.bwa.index bwaIndexAttrs ref}/*; do ln -s $f |