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path: root/tools/bwa-mem2.nix
AgeCommit message (Collapse)Author
2022-02-09don't strip store paths from bamsJustin Bedo
Due to BAM compression attempting to strip store paths is a waste of time.
2021-12-06parameterise RG line as nix attribute setJustin Bedo
Allows more seamless transitioning between alingment algorithms
2021-10-29treewide reformatting and simplificationJustin Bedo
- simplify with statix - reformat with nixpkgs-fmt
2021-07-28bugfix: use unsorted type for alignment outputJustin Bedo
Most aligners are only pseudo-name sorted (i.e., pairs adjacant).
2019-06-21bwa-mem2: initJustin Bedo