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2018-12-10gridss: add java heapSize arguments.l-d-s
2018-11-29Correct argument for gridss option filel-d-s
2018-11-15Fix up gridss config file.l-d-s
2018-11-15Need to test config != nulll-d-s
2018-11-12Attempt to integrate config file into GRIDSS stagel-d-s
2018-10-29Split gridss into constituentsJustin Bedo
Wrap each individual command for GRIDSS so that bionix executed the pipeline rather than GRIDSS. This patch introduces a "call" function that executed the whole pipeline in bionix on an arbitrary BAM file. Resolves #10.