9son.gitJSON parser for Plan 922 months
LinProg.gitHaskell library with EDSL for linear programming22 months
bionix-wehi-workshop.gitMaterial for WEHI BioNix workshop8 months
bionix.gitFunctional, highly-reproducible bioinformatics pipelines7 months
clinvar.gitClinvar FZF based TUI22 months
codapca.gitPCA for compositional data3 months
flickrfs.gitFlicker 9P file server - deprecated: here for historical interest22 months
forth.gitForth implementation in assembly22 months
genodict.gitCompiles genomes to a dictionary representation and computes similarity between ...22 months
latexfmt.gitLaTeX formatter15 months
linalg.gitA very simple linear algebra library for plan 9.22 months
mavedb-scraper.gitScrapes MaveDB and merges assays into a SQLite database6 months
phylogenies.gitSubclonal phylogeny inference4 months
pmt.gitPoisson Margin Test implementation in R22 months
ppl.gitLazy probabilistic programming language reimplementation3 months
wehi-bioinformatics-talk-2022.gitTalk I gave in the Bioinformatics division seminar series at WEHI.5 months
xenomapper-hs.gitFilter primary alignments by a secondary alignment (for e.g., xenographs)22 months