9son.gitJSON parser for Plan 920 months
LinProg.gitHaskell library with EDSL for linear programming20 months
bionix-wehi-workshop.gitMaterial for WEHI BioNix workshop5 months
bionix.gitFunctional, highly-reproducible bioinformatics pipelines5 months
clinvar.gitClinvar FZF based TUI20 months
codapca.gitPCA for compositional data3 weeks
flickrfs.gitFlicker 9P file server - deprecated: here for historical interest20 months
forth.gitForth implementation in assembly20 months
genodict.gitCompiles genomes to a dictionary representation and computes similarity between ...20 months
latexfmt.gitLaTeX formatter13 months
linalg.gitA very simple linear algebra library for plan 9.20 months
mavedb-scraper.gitScrapes MaveDB and merges assays into a SQLite database4 months
phylogenies.gitSubclonal phylogeny inference7 weeks
pmt.gitPoisson Margin Test implementation in R20 months
ppl.gitLazy probabilistic programming language reimplementation2 weeks
wehi-bioinformatics-talk-2022.gitTalk I gave in the Bioinformatics division seminar series at WEHI.3 months
xenomapper-hs.gitFilter primary alignments by a secondary alignment (for e.g., xenographs)20 months