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| author | Justin Bedo <cu@cua0.org> | 2021-10-14 16:29:48 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2021-10-14 16:29:48 +1100 |
| commit | 270a4b2bd06f2c380429fee66c7398fad1bdbc1a (patch) | |
| tree | f0fe6516904176cb89da67453b5a16c1b9f2a4f2 | |
| parent | ad6cfe445504cdcc8689142046cd1142ebf3de7b (diff) | |
Revert "gridss: 2.12.0 -> 2.12.1"
This reverts commit 1ff1c9cf0bcc95a6555d1217598f55b7b9eae866.
As per github release page:
DO NOT USE: this release has a critical bug in the preprocessing step that removes all split reads
| -rw-r--r-- | tools/gridss.nix | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/tools/gridss.nix b/tools/gridss.nix index a002e69..bf7c518 100644 --- a/tools/gridss.nix +++ b/tools/gridss.nix @@ -5,9 +5,8 @@ with lib; rec { jar = pkgs.fetchurl { - url = - "https://github.com/PapenfussLab/gridss/releases/download/v2.12.1/gridss-2.12.1-gridss-jar-with-dependencies.jar"; - sha256 = "sha256-wH5O+vYKlWGDJTTnMgKYrSNtzoU7wDHqNraiW8xrxXA="; + url = "https://github.com/PapenfussLab/gridss/releases/download/v2.12.0/gridss-2.12.0-gridss-jar-with-dependencies.jar"; + sha256 = "sha256-GLLA1pfGuN6xkvO9iALkifkNJhTBtbyCaWaKxDujRGc="; }; /* Generate configuration file for GRIDSS. Takes attribute sets to GRIDSS ini style format. |