fastp: rename run to check for consistency with fastqc

3 files changed, 2 insertions, 2 deletions

diff --git a/test-tnpair.nix b/test-tnpair.nix
index 802a2bb..153a4c3 100644
--- a/test-tnpair.nix
+++ b/test-tnpair.nix
@@ -16,7 +16,7 @@ let
   nameSort = samtools.sort {nameSort = true;};
   flagstat = samtools.flagstat {};
   check-fastqc = fastqc.check {};
-  check-fastp = fastp.run {};
+  check-fastp = fastp.check {};
   callVariants = strelka.callSomatic {};
   markdup = samtools.markdup {};
   fixmate = samtools.fixmate {};
diff --git a/tools/fastp-run.nix b/tools/fastp-check.nix
index c7cbb3c..c7cbb3c 100644
--- a/tools/fastp-run.nix
+++ b/tools/fastp-check.nix
diff --git a/tools/fastp.nix b/tools/fastp.nix
index 52c9041..90f6c1d 100644
--- a/tools/fastp.nix
+++ b/tools/fastp.nix
@@ -4,6 +4,6 @@ with bionix;
 
 rec {
     app = pkgs.callPackage ./fastp-app.nix {};
-    run = callBionixE ./fastp-run.nix;
+    check = callBionixE ./fastp-check.nix;
 }