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| author | Justin Bedo <cu@cua0.org> | 2019-12-05 10:50:29 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2019-12-05 10:50:47 +1100 |
| commit | ce7603274e146a3c63d2d090c7bf2293a6b028c9 (patch) | |
| tree | d3ce902c29193f69dba023c00afe7a89f8f8e5f1 | |
| parent | 3282990ce4cf681a42c38c6795394dacf508525d (diff) | |
platypus: remove debugging code
| -rw-r--r-- | tools/platypus-callVariants.nix | 1 |
1 files changed, 0 insertions, 1 deletions
diff --git a/tools/platypus-callVariants.nix b/tools/platypus-callVariants.nix index abe2a6b..bb0faf1 100644 --- a/tools/platypus-callVariants.nix +++ b/tools/platypus-callVariants.nix @@ -28,7 +28,6 @@ stage { ln -s ${bionix.samtools.faidx indexAttrs ref} ref.fa.fai ${concatMapStringsSep "\n" (p: "ln -s ${p} ${filename p}.bam") inputs} ${concatMapStringsSep "\n" (p: "ln -s ${bionix.samtools.index bamIndexAttrs p} ${filename p}.bai") inputs} - ls -l platypus callVariants \ --nCPU=$NIX_BUILD_CORES \ --refFile=ref.fa \ |