diff options
| author | Justin Bedo <cu@cua0.org> | 2022-02-09 12:22:30 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2022-02-09 12:22:30 +1100 |
| commit | 25515012d0051a4074de0e4692b7fd336c7ddf4a (patch) | |
| tree | 6bf039a2aa9ce085272d7b953a20ad5a9b511660 /tools | |
| parent | 96c9a8880a690d2d8058663a805c3b363e416a8d (diff) | |
whisper: fix sorting for sam output
Diffstat (limited to 'tools')
| -rw-r--r-- | tools/whisper-align.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/whisper-align.nix b/tools/whisper-align.nix index e76e921..38bcedf 100644 --- a/tools/whisper-align.nix +++ b/tools/whisper-align.nix @@ -35,7 +35,7 @@ stage { ${optionalString (input2 != null) (fq input2)} \ > $out ''; - passthru.filetype = if bamOutput then filetype.bam { inherit ref; sorting = sort.none { }; } else filetype.sam { inherit ref; sorting = sort.name { }; }; + passthru.filetype = if bamOutput then filetype.bam { inherit ref; sorting = sort.none { }; } else filetype.sam { inherit ref; sorting = sort.none { }; }; passthru.multicore = true; stripStorePaths = false; } |