diff options
| -rw-r--r-- | tools/bwa-mem.nix | 3 |
1 files changed, 1 insertions, 2 deletions
diff --git a/tools/bwa-mem.nix b/tools/bwa-mem.nix index 0d0f7d8..3208e48 100644 --- a/tools/bwa-mem.nix +++ b/tools/bwa-mem.nix @@ -29,8 +29,7 @@ in stdenv.mkDerivation { done cores=$(echo $NIX_BUILD_CORES ${optionalString bamOutput "- 1"} | bc) if [[ $cores -lt 1 ]] ; then - >&2 echo "not enough build cores" - exit 1 + cores=1 fi bwa mem ${optionalString (flags != null) flags} -t $cores ref.fa ${fq input1} \ ${optionalString (input2 != null) (fq input2)} \ |