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-rw-r--r--test-tnpair.nix5
1 files changed, 1 insertions, 4 deletions
diff --git a/test-tnpair.nix b/test-tnpair.nix
index 8d9dc88..ae88549 100644
--- a/test-tnpair.nix
+++ b/test-tnpair.nix
@@ -41,10 +41,7 @@ let
glvariants = strelka.call {} (builtins.attrValues alignments);
platypusVars = platypus.call {} (builtins.attrValues alignments);
octopusVars = octopus.call {} (builtins.attrValues alignments);
- shards = pipe [
- (shard.fastQPair 2)
- (map (bwa.align {inherit ref;}))
- ] normal.files;
+ shards = map (bwa.align {inherit ref;}) (shard.fastQPair 2 normal.files);
};
tnpairResult = processPair tnpair;