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Functional, highly-reproducible bioinformatics pipelines
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gridss-softClipsToSplitReads.nix
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Author
2022-02-09
don't strip store paths from bams
Justin Bedo
2021-10-29
treewide reformatting and simplification
Justin Bedo
2020-09-02
gridss: add missing flags parameter
Justin Bedo
2019-03-28
gridss: less chatty logs
Justin Bedo
2019-03-15
add multicore passthru flag
Justin Bedo
2019-01-09
large refactor
Justin Bedo
2018-12-11
Merge branch 'master' of https://github.com/PapenfussLab/bionix
l-d-s
2018-12-11
gridss: fix softClipsToSplitReads after assembly
Justin Bedo
2018-12-10
gridss: add java heapSize arguments.
l-d-s
2018-11-29
Correct argument for gridss option file
l-d-s
2018-11-22
gridss: restructure gridss pipeline
Justin Bedo
2018-11-22
gridss: fix configure file optional string error
Justin Bedo
2018-11-15
gridss.softClipsToSplitReads: sort ordering is not preserved
Justin Bedo
2018-11-13
Merge branch 'master' of https://github.com/PapenfussLab/bionix
l-d-s
2018-11-12
Attempt to integrate config file into GRIDSS stage
l-d-s
2018-11-07
Add bwa to softClipsToSplitReads
l-d-s
2018-10-29
Split gridss into constituents
Justin Bedo